Topics

A: abiogenesis : algorithms of evolution : archaea :

B: bacteria : biopoiesis :

C: cell biology : chromosomes : Cyanobacteria :

D: damage/repair DNA : decay : development : diagrams :

E: energy : enzymes, specific enzymes : eukaryotes : evo-devo : evolution, evolution :

G: genome :

M: mechanisms of evolution : metabolism : molecular genetics : mutation :

O: origin of life : organics :

P: paleogeology : photosynthesis : phylogeny :

R: RNA processing : prokaryotes : protein, specific proteins : refuting id : regulation : replication : repair/damage DNA : research : RNA :

S: serial endosymbiosis theory : signaling : splicing : stromatolites :

T: tables : taxonomy : transcription : translation :


Specific Enzymes/Types : ·· A · adenylyl (adenylate) cyclase · allosteric enzymes · AP endonuclease (Ape1) ·· C · cAMP-dependent protein kinase · cyclin-dependent kinases ·· D · DAGKs · diacyl glycerol kinases · DNA glycosylase · DNA ligase · DNA Ligase I · DNA polymerases · DNA polymerase I · DNA polymerase beta · DNase IV · · E · exonuclease 1 · exosome ·· F · focal adhesion kinases (FAKs) · Fen1 · Flap Endonuclease FEN-1 · G · guanylate cyclases · guanyl cyclase ·· H · hOGG1 · hOGG1 oxoG repair ·· I · inducible transcription factors ·· L · LigIII · · M · MAP kinase · mitogen activated protein kinases · Msh2-Msh3 · MutS, MutL, and MutH ·· O · 8-oxoguanine glycosylase · oxoG repair hOGG1 ·· P · PCNA · phosphatases · phosphodiesterases · phospolipases · phospholipase C-gamma · PLC-G · protein kinase A · protein kinase C · protein tyrosine kinases (PTKs) · receptor tyrosine kinases · R · RNA polymerase · Replication factor C · reverse transcriptase · ribozymes · RNA polymerase II · RTKs ·· S · serine/threonine kinases · spliceosomal-mediated RNA trans-splicing · SMaRT ·· T · trans-splicing ribozymes ·· U · UvrD ·· X · XRCC1 ·

Specific proteins/types : ·· C · cAMP receptor binding protein · cofactor · core histones H2A, H2B, H3, and H4 · CRE-binding protein CREB · cytokines ·· E · elongation factor EF ·· G · general transcription factors ·· H · helicases : Helicase II · heterochromatin · histone · HP1 · I · inducible transcription factors · L · · LexA repressor ·· M · mCAT2 receptor · motor proteins ·· N · nucleosome ·· P · PcG proteins · PCNA · Polycomb group · proteome ·· R · RecA · regulatory proteins · repressor proteins · Receptor Tyrosine Kinases (RTKs) · ribosomes · RPA ·· S · serine rich (SR) splicing factors · silencers · Ski7p · small nuclear ribonucleoproteins (snRNPs) · spliceosome · SR (serine rich) splicing factors ·· T · TATA binding protein · TBP · trans-acting factors · trithorax group (trxG) ·· U · ubiquitin (Ub) · UPF1 UPF2 · upstream transcription factors ·

Special Functions : ··· Cellular Adhesion Molecules · cadherins · catenins ·immunoglobulin superfamily · integrins · selectins · focal adhesion kinases (FAKs) ··· Cellular Stress Response · chaperones · hsp40 · hsp60 · hsp70 · hsp90 · TCP1 · cnp60 · molecular chaperones ··· Chemotaxis ··· Cytokines · TNF · cytokine receptors ··· Protein Degradation · proteasome · ubiquitin (Ub) ···Regulation · cellular differentiation · gene regulation · metabolic regulation ··· Second messengers · cAMP · cGMP · calcium ions ·· DAG · diacylglycerol · IP3 ··· Signal Transduction ·· A · AKAPs ·· C · cAMP receptor binding protein · cellular signal transduction · chemotaxis · cytokines . cytokine receptors ·· D · DAG . DAGKs . diacylglycerol . diacyl glycerol kinase ·· E · ERKs ·· F · focal adhesion kinases (FAKs) ·· G · G-proteins · GPCRs · GPCR families · guanylate cyclases · guanyl cyclase ·· H · hormones ·· K · kinases ·· M · MAP kinase · mitogen activated protein kinases ·· N · Nitric Oxide · neurotransmission · neuronal interconnections ·· P · PDZ domain · PKA, protein kinase A · phospholipase C-gamma . PLC-G · phosphorylation · PKC · protein kinase A · protein kinase C · protein tyrosine kinases · phosphotransfer-mediated signaling pathways · Protein Kinase Signaling Networks ·· R · Ras · receptor tyrosine kinases · RTKs ·· S · second messengers · serine/threonine kinases · signaling · signaling gradients · signal transduction · two-component systems ·

 List of Diagrams  List of Tables

Tables: Biology/Chemistry:  Biological variation  Cell Adhesion Molecules  Cell signaling  Electron Transport Chain vs Oxidative Phosphorylation  Enzymes Function Krebs Cycle  Enzymes Cofactors of Krebs Cycle  Gene Regulation in E.coli  Immune Cytokines  Phosphate-handling Enzymes  Regulatory Proteins Sequences  Receptor Tyrosine Kinases(RTK)  Second Messengers  Second Messengers  lipoproteins  saturation of triacylglygerols

Prokaryotes:
 Comparisons of Eubacteria, Archaea, and Eukaryotes  Comparison of Plant and Bacterial Photosynthesis  Cell walls of Prokaryotes  Electron acceptors for respiration and methanogenesis in prokaryotes  Gene Regulation in E.coli  Lithotrophic prokaryotes  Structure of bacteriochlorophylls

Geology:
 Elemental Composition of Crust  Minerals & Rocks: Carbonates  Minerals & Rocks: Evaporates, Sulphates  Minerals & Rocks: Metamorphic  Minerals & Rocks: Oxides
 Weathering of Minerals